MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Shigella flexneri
19428wH2_1568
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 237
bases: 5,139,722 bps
CDS: 4,826
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 89
misc RNA:
Total features: 4,926
Total number of protein coding genes annotated/found:
4,826
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Items 41 - 60
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of 242 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5015|JADGKR010000011.1
SEQF5015_00285
Genome Viewer
NA
AA
1815/605
131321-129507
hypothetical protein
SEQF5015|JADGKR010000011.1
SEQF5015_00287
Genome Viewer
NA
AA
363/121
134449-134811
hypothetical protein
SEQF5015|JADGKR010000011.1
SEQF5015_00290
Genome Viewer
NA
AA
309/103
136939-136631
hypothetical protein
SEQF5015|JADGKR010000011.1
SEQF5015_00297
Genome Viewer
NA
AA
441/147
144483-144923
hypothetical protein
SEQF5015|JADGKR010000011.1
SEQF5015_00298
Genome Viewer
NA
AA
1230/410
144987-146216
hypothetical protein
SEQF5015|JADGKR010000011.1
SEQF5015_00300
Genome Viewer
NA
AA
903/301
146874-147776
ISNCY family transposase ISRor2
SEQF5015|JADGKR010000124.1
SEQF5015_00309
Genome Viewer
NA
AA
249/83
260-508
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00314
Genome Viewer
NA
AA
438/146
1489-1052
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00315
Genome Viewer
NA
AA
366/122
2159-1794
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00317
Genome Viewer
NA
AA
462/154
7441-6980
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00328
Genome Viewer
NA
AA
369/123
22527-22159
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00329
Genome Viewer
NA
AA
249/83
22840-22592
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00350
Genome Viewer
NA
AA
198/66
47965-48162
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00354
Genome Viewer
NA
AA
801/267
51932-51132
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00355
Genome Viewer
NA
AA
357/119
52352-51996
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00361
Genome Viewer
NA
AA
1239/413
57755-58993
putative zinc-binding alcohol dehydrogenase
SEQF5015|JADGKR010000012.1
SEQF5015_00383
Genome Viewer
NA
AA
264/88
78312-78049
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00395
Genome Viewer
NA
AA
483/161
90689-91171
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00397
Genome Viewer
NA
AA
708/236
92382-93089
hypothetical protein
SEQF5015|JADGKR010000012.1
SEQF5015_00398
Genome Viewer
NA
AA
1428/476
93086-94513
hypothetical protein
🡄
Items 41 - 60
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click arrow to navigate by page or
of 242 pages
Genome Viewer
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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